CDS

Accession Number TCMCG006C84143
gbkey CDS
Protein Id XP_013688361.1
Location join(13980692..13981070,13983382..13983656,13983751..13983985,13984083..13984415,13984496..13984581,13984949..13985062,13985139..13985443,13985531..13985797,13985884..13986643)
Gene LOC106392120
GeneID 106392120
Organism Brassica napus

Protein

Length 917aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013832907.2
Definition lipoxygenase 6, chloroplastic isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category E
Description may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding
KEGG_TC -
KEGG_Module M00113        [VIEW IN KEGG]
KEGG_Reaction R03626        [VIEW IN KEGG]
R07864        [VIEW IN KEGG]
R07869        [VIEW IN KEGG]
KEGG_rclass RC00561        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00454        [VIEW IN KEGG]
EC 1.13.11.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00591        [VIEW IN KEGG]
ko00592        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00591        [VIEW IN KEGG]
map00592        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009611        [VIEW IN EMBL-EBI]
GO:0009694        [VIEW IN EMBL-EBI]
GO:0009695        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016165        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016701        [VIEW IN EMBL-EBI]
GO:0016702        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030258        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0034440        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0042446        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051213        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072330        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTTGTAGCATCTCCGGTGAAAACAAACTCCTACGGTGCCGGCCTGGTGAGATTTCCGGCGTTTCCCGTACTTCCACGGCGGCGACAACACATAGTTCCACTTTCCAGAAAAGTCCGAGCTGTGATAAGCCGGGAAGAAAAGACGGTGGATCAAGAAGATGGAAAAAATACAAACGGTTCACTAGTAAGTAACTCACCCGCGTTTCCATGGCAGAGATCTAAGTATACGGGAACAAAAACGGTCATTGCGGTTGTGAAGATCAGGAAGAAGATGAGAGAGAAGCTAACTGAGAGGGTTGAGCATCAACTAGAGCTTTTAATGAAAGCCATAGGTCAAGGGATGTTGATTCAGCTTGTTAGTGAAGAAATCGATCCTGAAACTGGTTCAGGTAGGAGGAGTTTAGAAACTCCAGTGCTAGGACTCCCCAAGGCTCGGAACGATCCTAGAAACCTTGAGTTCACAGCCACCTTCACCGTACCGACTGACTTTGGTAAACCAGGTGCCATTCTTGTCACCAATCTCCTTTCCTCAGAGATTTGCTTGTCAGAGATTATCATCCGTGACGGCAGTGACACCATTCTCTTCCCTGGTAACACTTGGATCCACTCCAGGAATGATAACCCTGATGGCAGGATTATCTTCAGAAGTCAACCATGCTTACCTTCCCACACCCCTGCCGGGATCAAAGAACTACGAGAAAAGGACTTGAGAAGTGTCCGTGGTAATGGAAAAGGCGACAGAAAGCCTCATGAGAGGATCTATGACTACGATGTTTACAACGATTTAGGCGATCCACGTAAAAAAGATCGAGTTAGACCTATTCTTGGTGGACCAGAGATGCCGTATCCAAGACGCTGCAGGTCTGGCCGGCCTCTCGTTTCAAAAAACCCACCGTGTGAGAGCAGAGGAAAAGACAAGGAGGAGTTTTATGTTCCAAGAGACGAAGAATTCGAGGATATCAAGAGAGACACTTTCACAGCTGGGAGATTAAAGGCTCTCTTTCACAACCTAGTCCCATCTATTGCAGCTGCATTGTCAAACTTAGACATTCCATTCACATGCTTCTCGGATATCGATAAACTATATAAATGTGACATTGTCTTGAGACCCACGGAGCCAAAAGACACAGGTCTTGGGGGCTTTTTTGGTAGTTTTGTGGATGGGATCCTCAACGTTGGAGAAACACTACTAAAATACGACACACCAGCCGTTATAAAATCGGACAGGTTTGCATGGCTGAGAGACAATGAATTTGGACGTCAGGCTCTCGCTGGTGTCAACCCTGTGAACATTGAGCTTCTGAAGGAGCTGCCAATTCGAAGCAAGCTTGACCCGGCTGTATATGGACCCCAAGAATCTGCTCTCACAGAAGAAGTGATTGCTAAAGAAGTTCAACACTATGGAATGACTTTGGAACAGGCGTTTGAAGAGAAGAGGTTGTTTCTATTGGACTACCATGACATGCTCTTGCCATTTGTGGACAAGATAAACTCCCTCAAAGACGATCCAAGAAAAACATATGCATCAAGAACAATCTTCTTCTATTCAAAGGCGGGTGCACTGAGGCCGTTGGCTATAGAGCTCTCGTTGCCTCCCACGCCGGATAACGATAACAAGTTCGTTTATGTGCATGGACATGACGCTACCACTCACTGGATGTGGAAACTAGCTAAAGCTCATGTCTGCTCAAACGATGCTGGTGTTCATCAACTAGTAAACCACTGGCTAAGGACTCATGCTTCCATGGAGCCATACATCATTGCTACTAACAGACAGCTGAGTACAATGCATCCGGTTTACAAGCTGCTTCACCCTCACATGCGCTACACGCTAGAAATCAATGCGCGTGCACGTAAGAGCCTAATCAATGGAGGAGGAATCATCGAAAGTTGCTTCACTCCAGGAAAATACTCGATGGAACTAAGCTCTGCGGCGTACAAGAACATGTGGCGGTTTGACATGGAAGGACTTCCTGCTGATCTTGTCCGAAGGGGAATGGCAGAGGAGGATTCTTCAGCGGAGTGTGGTGTGAAGCTTGTGATCGAAGACTATCCGTATGCAGCAGATGGTCTTTTGATCTGGAAAGCCATCAAGAACCTAGTTGAATCATATGTGAAACACTTCTACTCTGATCCTGACTCCATAACATCTGACTTTGAGCTCCAAGCTTGGTGGGACGAGATCAAGAACAAAGGTCACTACGACAAGAAAGACGAGCCTTGGTGGCCTAAACTCAACACAACGCAATACTTGTCCGAAATCCTAACCAACATGATATGGATCGCGTCGGGACAACACGCAGCCCTTAACTTCGGGCAGTACCCGTTCGGAGGGTATGTCCCGAACCGTCCTACGCTGTTGAGGAAACTTATACCACACGAAAACGATCCAGACTACGAAATGTTCATGAGAAATCCTCAGTACAGCTTCCTGAGCTCGTTACCGACACAGCTCCAAGCAACAAAAGTGATGGCGGTACAAGAGACGCTCTCTACGCATTCTGCTGACGAAGAGTACTTGATCGACCTGAAAGAAAACCAGAGACGTTGGTTTCAAGATGAGGAAGTGGTTAAGTATTTTAGCAAGTTCACGGAGGAGCTTGAGGAGATAGAGAAGAAGATCGATAATAGGAACAAAGATAAGAAGCTGAAGAACAGAACAGGTGCTGGGATGCCTCCTTATGAACTACTTATACCTACTTCACCACATGGAGTCACTGGCCGTGGTATTCCTAACAGCATTTCCATCTAG
Protein:  
MFVASPVKTNSYGAGLVRFPAFPVLPRRRQHIVPLSRKVRAVISREEKTVDQEDGKNTNGSLVSNSPAFPWQRSKYTGTKTVIAVVKIRKKMREKLTERVEHQLELLMKAIGQGMLIQLVSEEIDPETGSGRRSLETPVLGLPKARNDPRNLEFTATFTVPTDFGKPGAILVTNLLSSEICLSEIIIRDGSDTILFPGNTWIHSRNDNPDGRIIFRSQPCLPSHTPAGIKELREKDLRSVRGNGKGDRKPHERIYDYDVYNDLGDPRKKDRVRPILGGPEMPYPRRCRSGRPLVSKNPPCESRGKDKEEFYVPRDEEFEDIKRDTFTAGRLKALFHNLVPSIAAALSNLDIPFTCFSDIDKLYKCDIVLRPTEPKDTGLGGFFGSFVDGILNVGETLLKYDTPAVIKSDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSKLDPAVYGPQESALTEEVIAKEVQHYGMTLEQAFEEKRLFLLDYHDMLLPFVDKINSLKDDPRKTYASRTIFFYSKAGALRPLAIELSLPPTPDNDNKFVYVHGHDATTHWMWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIATNRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYSMELSSAAYKNMWRFDMEGLPADLVRRGMAEEDSSAECGVKLVIEDYPYAADGLLIWKAIKNLVESYVKHFYSDPDSITSDFELQAWWDEIKNKGHYDKKDEPWWPKLNTTQYLSEILTNMIWIASGQHAALNFGQYPFGGYVPNRPTLLRKLIPHENDPDYEMFMRNPQYSFLSSLPTQLQATKVMAVQETLSTHSADEEYLIDLKENQRRWFQDEEVVKYFSKFTEELEEIEKKIDNRNKDKKLKNRTGAGMPPYELLIPTSPHGVTGRGIPNSISI